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Chapter 7 Spatial Modeling
James P. Keener

7.1 One-dimensional formulation
7.1.1 Conservation in one dimension
7.1.2 Fick's law of diffusion
7.1.3 Advection
7.1.4 Flux of ions in a field
7.1.5 The cable equation
7.1.6 Boundary and initial conditions
7.2 Important examples with analytic solutions
7.2.1 Diffusion through a membrane
7.2.2 Ion flux through a channel
7.2.3 Voltage clamping
7.2.4 Diffusion in a long dendrite
7.2.5 Diffusion into a capillary
7.3 Numerical solution of the diffusion equation
7.4 Multidimensional problems
7.4.1 Conservation law in multiple dimensions
7.4.2 Fick's law in multiple dimensions
7.4.3 Advection in multiple dimensions
7.4.4 Boundary and initial conditions for multiple dimensions
7.4.5 Diffusion in multiple dimensions: symmetry
7.5 Traveling waves in nonlinear reaction-difusion equations
7.5.1 Traveling wave solutions
7.5.2 Traveling wave in the Fitzhugh-Nagumo equations
7.6 Exercises
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